Adding plotting notebooks and update computation of NaMaster covariance #168
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…covariance computation and the impact of leakage correction. Updated the whisker plot script to add those lines.
…relation function computation on glass mock. Fix bug in cosmology.py. Add fiducial scale cuts to template ini files for inference.
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cailmdaley
approved these changes
Dec 16, 2025
Reorganizes workflow rules to match the epistemic hierarchy: - specs.smk: method specs (foundational techniques) - claims.smk: evidence-generating rules (testable assertions) - synthesis.smk: paper integration, dashboard, macros Archives bmodes.smk (diagnostic plots not in paper DAG) and epistemics_v2.smk (now split into three files). DAG structure unchanged; dry-run verified. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <[email protected]>
Add chunked pure EB computation infrastructure for parallelizing the expensive integral calculations. Remove obsolete archive rules now superseded by the specs/claims/synthesis structure. - Add precompute_pure_eb_chunk.py and gather_pure_eb_chunks.py - Extend covariance rules for masked covariance - Update harmonic/config space PTE scripts - Ignore notebooks/cosmo_val/results/ Co-Authored-By: Claude Opus 4.5 <[email protected]>
Co-Authored-By: Claude Opus 4.5 <[email protected]>
Resolve conflicts: - cosmo_val.py: Keep develop's linear binning fix (lmax mismatch), sachaguer's C_ell calculation and mask handling - .gitignore: Keep sachaguer's simpler patterns Co-Authored-By: Claude Opus 4.5 <[email protected]>
Co-Authored-By: Claude Opus 4.5 <[email protected]>
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This PR contains many updates I made in the repo including: